MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Ligilactobacillus murinus
2_2BalbC1BO2_S2
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 224
bases: 2,332,310 bps
CDS: 2,313
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 61
misc RNA:
Total features: 2,381
Total number of protein coding genes annotated/found:
2,313
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Items 1 - 20
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5054|JADGLU010000137.1
SEQF5054_01485
Genome Viewer
NA
AA
285/95
39-323
hypothetical protein
SEQF5054|JADGLU010000201.1
SEQF5054_02208
Genome Viewer
NA
AA
288/96
39-326
hypothetical protein
SEQF5054|JADGLU010000065.1
SEQF5054_00692
Genome Viewer
NA
AA
417/139
71-487
hypothetical protein
SEQF5054|JADGLU010000041.1
SEQF5054_00393
Genome Viewer
NA
AA
2685/895
73-2757
C protein alpha-antigen
SEQF5054|JADGLU010000163.1
SEQF5054_01820
Genome Viewer
NA
AA
435/145
83-517
UvrABC system protein A
SEQF5054|JADGLU010000202.1
SEQF5054_02219
Genome Viewer
NA
AA
1092/364
83-1174
hypothetical protein
SEQF5054|JADGLU010000007.1
SEQF5054_00076
Genome Viewer
NA
AA
840/280
86-925
Putative transposase InsK for insertion sequence element IS150
SEQF5054|JADGLU010000103.1
SEQF5054_01218
Genome Viewer
NA
AA
840/280
86-925
Putative transposase InsK for insertion sequence element IS150
SEQF5054|JADGLU010000127.1
SEQF5054_01303
Genome Viewer
NA
AA
840/280
86-925
Putative transposase InsK for insertion sequence element IS150
SEQF5054|JADGLU010000178.1
SEQF5054_01981
Genome Viewer
NA
AA
840/280
86-925
Putative transposase InsK for insertion sequence element IS150
SEQF5054|JADGLU010000141.1
SEQF5054_01510
Genome Viewer
NA
AA
222/74
89-310
hypothetical protein
SEQF5054|JADGLU010000024.1
SEQF5054_00255
Genome Viewer
NA
AA
426/142
94-519
IS30 family transposase IS1062
SEQF5054|JADGLU010000052.1
SEQF5054_00437
Genome Viewer
NA
AA
426/142
94-519
IS30 family transposase IS1062
SEQF5054|JADGLU010000053.1
SEQF5054_00441
Genome Viewer
NA
AA
432/144
94-525
IS30 family transposase IS1062
SEQF5054|JADGLU010000090.1
SEQF5054_01169
Genome Viewer
NA
AA
426/142
94-519
IS30 family transposase IS1062
SEQF5054|JADGLU010000132.1
SEQF5054_01344
Genome Viewer
NA
AA
426/142
94-519
IS30 family transposase IS1062
SEQF5054|JADGLU010000191.1
SEQF5054_02163
Genome Viewer
NA
AA
426/142
94-519
IS30 family transposase IS1062
SEQF5054|JADGLU010000011.1
SEQF5054_00103
Genome Viewer
NA
AA
687/229
106-792
hypothetical protein
SEQF5054|JADGLU010000015.1
SEQF5054_00178
Genome Viewer
NA
AA
1323/441
107-1429
Amino-acid permease RocC
SEQF5054|JADGLU010000069.1
SEQF5054_00819
Genome Viewer
NA
AA
1113/371
113-1225
IS110 family transposase ISPye17
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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